Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904738.1_cds_XP_016454865.1_48848
CDS Infomation

[gene=LOC107779037] [db_xref=GeneID:107779037] [protein=receptor-like protein kinase HSL1 isoform X2] [protein_id=XP_016454865.1] [location=join(285625..285910,286001..288082,288253..288647)] [gbkey=CDS]
Sequence

ATGGCTCCTCAGAAAGTTATTATCCTTCTTGTGTTCTTCCTCGCCATTTCCAGCTTTTGT
CAAGGGACTATAAATGAGCAGTCTCAGTTCTTTGCTCTATTGAAGAAGTCCGTCAAAGGG
AACTCCTTGTCTGATTGGGATGGCAAACCTATTTGCAACTTTAGTGGCGTTGGTTGTGAT
GATCAGGGGAATGTTATCAAGATTGATCTTTTCGGATGGTTGCTATCTGGCCTATTTCCT
GATGATGTGTGCTCTTTTTTCCCAGGGTTGCGAATTCTTCGTCTTGGACCATTGCCAGAC
TTGTCTCCTTTGCAGTCTTTGAGGTTGCTCAACCTTTCATATAACCACTTCACCGGTGAA
TTTCCTTTGTCAATTATCAACCTCACCAGTCTAGAGCTGCTGGATTTCAATGAAAATCAC
GATTTCATTCCATGGCAACTGCCAAAGGATATTTCAAGGTTGACTAAAATCCGGTGGATG
ATCTTAACTGCTTGCAAGTTACATGGAACAATCCCAGCATCGATAGGAAATATGACGTCT
CTTGTAGATCTTGAATTGAGCGAGAATCGCTTAACTGGTCGGATTCCAATAGAGCTGGGG
CAGCTGAAGAAGTTGAAAATGCTTGAACTTTACTACAACCAACTTGAGGGTGAAATACCT
GAGGAGCTCGGAAATCTGACTGAACTTGTGGATTTGGATATGTCAGTCAACAGACTGACA
GGCAAAATTCCAGAATCTATATGCCGCCTACCAAAGCTGCAAGTGTTGCAGATATATAAC
AACACTATTTCAGGAGACTTTCCAGCCTCCCTTGCAAACTCGACCACCCTAACCATCCTA
TCACTTTATGATAATTACCTGACAGGAGAAATCCCACATAATTTTGGTGTTTCATCAGCT
TTACTTGCATTGGACTTGTCAGAAAATGAATTATCTGGAGAATTACCAGCTCAGCTGTGT
CACGGAGATAAGTTGATGTACATTCTTCTACTCCAAAACATGTTCTCAGGACAAGTGCCG
GAAAGCTATGCAAAATGTGAGACTCTCATCCGCTTCCGAGTTAGTTACAATCTTTTGGGG
GGAAGACTACCAGAAATGCTTCTAGCTCTTCCACATGCTTCAATTATTGACGTGAGCTAT
AACAATTTAACTGGTTCAATCCCCACAACCATTGGAAAGGCGTTCAACTTGTCGGAGCTG
TTCATGCAGAGTAACAGACTTTCTGGAACAGTTCCTCCTCAAATTTCAACAACTACCAAT
CTAGTCAAGATTGACCTCAGCAATAACCTCTTGTCTGGACCCATTCCTCCAGAACTTGGT
AGCCTCAAAAGGCTCAATTTGTTGATCTTACAAGGTAATAAGTTAACTTCCTCCATTCCT
GAGACTCTTTCTTCACTTAACTCTCTCAATTATCTAGACCTGTCAAATAATTTTTTGACG
GGTAAGATTCCTGAAAGCCTCGGTGCACTGCTACCAAATTCCATGAATTTCTCAAACAAT
TTGCTTTCTGGTCCTGTACCTCCCTTATTTATAACGGGAGGTGTCCTGGAAAGTTTTTCT
GGCAATCAAGGACTCTGTGTTCCCTCTTTTCTGAGTTCATCTGGCGAAGATTTTCCTCTA
TGCCCACAAAATTATGATCGGAAGAAAAGAAACCTTTTCTGGGTTATCGGGATATCCTTG
GGAATTGTAATTCTTGGATTCGTGTTGTTTCTCAAGAGATGGCGGAAGGCGATGGAACAC
GAGGATTCCTTGTCATCGTCATTTTTCACGTATGATGTCAAGAGTTTCCATCGCTTAAGT
TTTGATGAACGTGAAATTTTTGAAGCCATGATTGAGAAAAACATTGTTGGATATGGAGGA
TCTGGAGCTGTCTATAAGATTGACTTAAGTAATGGAGGAGTTGTTGCTGTAAAGAAGCTC
TGGAGTCATAAACACAAGCAGTCTCTTTTAGAGAATAAACTATTTTTGGACAAGGAGCTT
AAAACAGAGGTTGAAACTCTTGGTAACATAAGGCACAACAACATTGTGAAGTTATACTGC
TATTTCTCTAATTTGGACTGTAGTTTATTGGTTTACGAGTACATGCAAAATGGGAATCTT
GGGGATGCTCTTCACGGAGGGAAAGTCCTTTTGGATTGGCCTACTCGTCATCAGATTGCA
TTGGGGATAGCACAAGGTTTGGCCTATCTTCACCATGATATTTTGCCACCAATCATTCAC
AGAGACATCAAATCCACCAACATCCTCCTCAACATTGATTACCAGCCAAAGGTCGCGGAT
TTTGGAATAGCCAAAGTCTTGCAAGCCAAAGGAGGGAAAGATTGTACAACCACAGTTATT
GCAGGGACATATGGTTACTTGGCTCCAGAATACGCATATTCTTCCAAGGCGACCACAAAA
TGTGATGTCTATAGTTTTGGAGTTGTTTTAATGGAACTGATCACGGGGAAGAAGCCAGTT
GAGACAGAATTTGGGGAGAATAAGAACATTGTTTATTGGGTTTCAACTAAGGCGGACACA
AAAGAAGGAGCATTTGAGGTCTTAGACAAAAAAATCTCAGGACCATTCAAGGAAGAGATG
ATTAAGGTGCTTCGGATTGCAATAGGTTGTACGTATAGTTCACCAGCCTTTCGTCCTACC
ATGAATGAAGTTGTTCAAATGCTAACCGAGGCAGAACCTCGCAGATACGACTGTTGCAAA
TTGCCAAATAAGAACAAACACACAGAGAATATCACTAAGCCAAAGGACATACCCAATTTG
TGA

Peptide Sequence

PEP ID

XP_016454865.1
PEP Infomation

PREDICTED: receptor-like protein kinase HSL1 isoform X2 [Nicotiana tabacum]
Sequence

MAPQKVIILLVFFLAISSFCQGTINEQSQFFALLKKSVKGNSLSDWDGKPICNFSGVGCD
DQGNVIKIDLFGWLLSGLFPDDVCSFFPGLRILRLGPLPDLSPLQSLRLLNLSYNHFTGE
FPLSIINLTSLELLDFNENHDFIPWQLPKDISRLTKIRWMILTACKLHGTIPASIGNMTS
LVDLELSENRLTGRIPIELGQLKKLKMLELYYNQLEGEIPEELGNLTELVDLDMSVNRLT
GKIPESICRLPKLQVLQIYNNTISGDFPASLANSTTLTILSLYDNYLTGEIPHNFGVSSA
LLALDLSENELSGELPAQLCHGDKLMYILLLQNMFSGQVPESYAKCETLIRFRVSYNLLG
GRLPEMLLALPHASIIDVSYNNLTGSIPTTIGKAFNLSELFMQSNRLSGTVPPQISTTTN
LVKIDLSNNLLSGPIPPELGSLKRLNLLILQGNKLTSSIPETLSSLNSLNYLDLSNNFLT
GKIPESLGALLPNSMNFSNNLLSGPVPPLFITGGVLESFSGNQGLCVPSFLSSSGEDFPL
CPQNYDRKKRNLFWVIGISLGIVILGFVLFLKRWRKAMEHEDSLSSSFFTYDVKSFHRLS
FDEREIFEAMIEKNIVGYGGSGAVYKIDLSNGGVVAVKKLWSHKHKQSLLENKLFLDKEL
KTEVETLGNIRHNNIVKLYCYFSNLDCSLLVYEYMQNGNLGDALHGGKVLLDWPTRHQIA
LGIAQGLAYLHHDILPPIIHRDIKSTNILLNIDYQPKVADFGIAKVLQAKGGKDCTTTVI
AGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGKKPVETEFGENKNIVYWVSTKADT
KEGAFEVLDKKISGPFKEEMIKVLRIAIGCTYSSPAFRPTMNEVVQMLTEAEPRRYDCCK
LPNKNKHTENITKPKDIPNL

Transcript Sequence

Gene sequence data has not been registered.